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Datasets of the Nasonia Genome Sequencing and Analysis Working Group

Nasonia vitripennis Genome Assembly version 1.0.

Nvit_1.0_scaffolds.fa.gz: contains the N. vitripennis genome assembled into scaffolds, in FASTA format, compressed.

 

Nasonia vitripennis official gene sets (OGS):

Note: The new N. vitripennis OGSv2.0 is currently being processed.

Official Gene Set v1.2

Nvit_OGSv1.2_official_id_map.txt
Nvit_OGSv1.2_pep.fa.gz
Nvit_OGSv1.2_rna.fa.gz
Nvit_OGSv1.2.gff2.gz

Official Gene Set v1.1

Nvit_OGSv1.1_pep.fa.gz

Official Gene Set v1: Gene models generated by the Gnomon pipeline at NCBI

Nvit_OGSv1_predicted_pep.fa.gz
Nvit_OGSv1_predicted_rna.fa.gz
Nvit_OGSv1_abinitio_pep.fa.gz
Nvit_OGSv1_abinitio_rna.fa.gz

 

EvidentialGene dataset generated by D. Gilbert

EvidentialGene dataset for Nasonia vitripennis , 2012/January

 

Supplemental Tables from the Nasonia genome paper

Table_S1_Orthologous_Groups.pdf
Table_S5_comp_miRNAs.xls
Table_S6_all_miRNAs.pdf
Table_S12_Dipause_Proteins.xls
Table_S17_OBPs.xls
Table_S24_Missing_genes.xls
Table_S25_Othology_model_changes.zip
Table_S26_Validation_of_OGS.xls
Table_S27_smallRNA.fa
Table_S29_PILER-Annotation.txt
Table_S30_Repeat-Library.fasta
Table_S31_Repeat_Coordinates.gff3.gz
Table_S32_PILER-masked-genome.fasta.zip
Table_S34_Genes-with-Repeats.txt
Table_S43_Repeat_families.pdf
Table_S45_Retroid-Annotation.txt
Table_S50_Hym_Specific_Orthologs.pdf
Table_S55_Bacterial_Scaffolds.pdf
Table_S58_Dnmts.fasta

 

Download Manual Annotation Data (Baylor College of Medicine)

nasonia_manual_annotation_db_freeze_062009.tar.gz